MulPSSM database

Browse through the Pali families on this page.

All alpha class All beta class Alpha/Beta class Alpha+Beta class Multidomain class Membrane proteins class Small proteins class

Membrane proteins class

f.1.1.1 - Colicin
f.1.2.1 - Diphtheria toxin, middle domain
f.1.3.1 - delta-Endotoxin (insectocide), N-terminal domain
f.1.4.1 - Bcl-2 inhibitors of programmed cell death
f.1.5.1 - Exotoxin A, middle domain
f.13.1.1 - Bacteriorhodopsin-like
f.13.1.2 - Rhodopsin-like
f.23.10.1 - Photosystem II reaction centre subunit H, transmembrane region
f.23.1.1 - Mitochondrial cytochrome c oxidase subunit IV
f.23.2.1 - Mitochondrial cytochrome c oxidase subunit VIa
f.23.3.1 - Mitochondrial cytochrome c oxidase subunit VIc
f.23.4.1 - Mitochondrial cytochrome c oxidase subunit VIIa
f.23.5.1 - Mitochondrial cytochrome c oxidase subunit VIIb
f.23.6.1 - Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
f.23.7.1 - Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
f.23.8.1 - Bacterial aa3 type cytochrome c oxidase subunit IV
f.23.9.1 - Bacterial ba3 type cytochrome c oxidase subunit IIa
f.23.21.1 - F1F0 ATP synthase subunit B, membrane domain
f.23.11.1 - Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
f.23.12.1 - ISP transmembrane anchor
f.23.13.1 - Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.23.14.1 - Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.23.15.1 - Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.23.16.1 - Subunit III of photosystem I reaction centre, PsaF
f.23.17.1 - Subunit VIII of photosystem I reaction centre, PsaI
f.23.18.1 - Subunit IX of photosystem I reaction centre, PsaJ
f.23.19.1 - Subunit XII of photosystem I reaction centre, PsaM
f.23.20.1 - Subunit PsaX of photosystem I reaction centre
f.23.22.1 - Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
f.23.23.1 - Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
f.23.24.1 - PetL subunit of the cytochrome b6f complex
f.23.25.1 - PetM subunit of the cytochrome b6f complex
f.23.26.1 - PetG subunit of the cytochrome b6f complex
f.23.27.1 - PetN subunit of the cytochrome b6f complex
f.23.28.1 - Preprotein translocase SecE subunit
f.23.29.1 - Sec-beta subunit
f.23.30.1 - Oligosaccharyltransferase subunit ost4p
f.23.31.1 - PsbL-like
f.23.32.1 - PsbJ-like
f.23.33.1 - PsbH-like
f.23.34.1 - PsbT-like
f.23.35.1 - PsbM-like
f.23.36.1 - PsbK-like
f.23.37.1 - PsbI-like
f.23.38.1 - Cytochrome b559 subunits
f.26.1.1 - Bacterial photosystem II reaction centre, L and M subunits
f.24.1.1 - Cytochrome c oxidase subunit I-like
f.25.1.1 - Cytochrome c oxidase subunit III-like
f.17.2.1 - Cytochrome c oxidase subunit II-like, transmembrane region
f.17.1.1 - F1F0 ATP synthase subunit C
f.17.3.1 - Magnesium transport protein CorA, transmembrane region
f.17.4.1 - Htr2 transmembrane domain-like
f.17.5.1 - PsbZ-like
f.18.1.1 - F1F0 ATP synthase subunit A
f.52.1.1 - ATP synthase B chain-like
f.53.1.1 - ATP synthase D chain-like
f.19.1.1 - Aquaporin-like
f.44.1.1 - Ammonium transporter
f.38.1.1 - Glycerol-3-phosphate transporter
f.38.1.2 - LacY-like proton/sugar symporter
f.54.1.1 - SNF-like
f.49.1.1 - Proton glutamate symport protein
f.20.1.1 - Clc chloride channel
f.14.1.1 - Voltage-gated potassium channels
f.15.1.1 - Small-conductance potassium channel
f.16.1.1 - Gated mechanosensitive channel
f.36.1.1 - Neurotransmitter-gated ion-channel transmembrane pore
f.34.1.1 - Mechanosensitive channel protein MscS (YggB), transmembrane region
f.39.1.1 - Multidrug resistance efflux transporter EmrE
f.40.1.1 - V-type ATP synthase subunit C
f.41.1.1 - Preprotein translocase SecY subunit
f.29.1.1 - Photosystem I subunits PsaA/PsaB
f.30.1.1 - Photosystem I reaction center subunit X, PsaK
f.31.1.1 - Photosystem I reaction center subunit XI, PsaL
f.22.1.1 - ABC transporter involved in vitamin B12 uptake, BtuC
f.37.1.1 - ABC transporter transmembrane region
f.35.1.1 - Multidrug efflux transporter AcrB transmembrane domain
f.32.1.1 - a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.21.1.2 - Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.21.1.1 - Formate dehydrogenase N, cytochrome (gamma) subunit
f.21.3.1 - Respiratory nitrate reductase 1 gamma chain
f.21.2.1 - Fumarate reductase respiratory complex cytochrome b subunit, FrdC
f.21.2.2 - Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
f.27.1.1 - 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.28.1.1 - Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
f.45.1.1 - Mitochondrial ATP synthase coupling factor 6
f.33.1.1 - Calcium ATPase, transmembrane domain M
f.3.1.1 - Light-harvesting complex subunits
f.55.1.1 - Photosystem II antenna protein-like
f.42.1.1 - Mitochondrial carrier
f.43.1.1 - Chlorophyll a-b binding protein
f.56.1.1 - MAPEG domain
f.57.1.1 - MgtE membrane domain-like
f.58.1.1 - MetI-like
f.51.1.1 - Rhomboid-like
f.59.1.1 - Cation efflux protein transmembrane domain-like
f.50.1.1 - Connexin43
f.4.1.1 - Outer membrane protein
f.4.1.2 - Outer membrane enzyme PagP
f.4.1.3 - GNA1870 immunodominant domain-like
f.4.1.4 - PsbO-like
f.4.4.1 - Outer membrane protease OMPT
f.4.4.2 - Outer membrane adhesin/invasin OpcA
f.4.5.1 - Autotransporter
f.4.2.1 - Outer membrane phospholipase A (OMPLA)
f.4.3.1 - Porin
f.4.3.2 - Maltoporin-like
f.4.3.3 - Ligand-gated protein channel
f.4.3.4 - Outer membrane protein transport protein
f.4.6.1 - Tsx-like channel
f.5.1.1 - Outer membrane efflux proteins (OEP)
f.46.1.1 - HlyD-like secretion proteins
f.6.1.1 - Leukocidin (pore-forming toxin)
f.6.1.2 - Porin MspA
f.7.1.1 - Lipovitellin-phosvitin complex; beta-sheet shell regions
f.8.1.1 - (Pro)aerolysin, pore-forming lobe
f.8.1.2 - ETX/MTX2
f.9.1.1 - Perfringolysin
f.10.1.1 - Viral glycoprotein, central and dimerisation domains
f.47.1.1 - VP4 membrane interaction domain
f.12.1.1 - Head and neck region of the ectodomain of NDV fusion glycoprotein
f.48.1.1 - OmpH-like
f.11.1.1 - Anthrax protective antigen