The sequences which have been used as reference for the generation of profiles for the family YhzD are highlighted in red. The profiles and the reference sequences for this family are given in a tar zipped format (Profiles are in ASN.1 format).

Download the tar zipped file.
Click here for help on generation of RPS-BLAST databases from the files given in above link

A3I3N7_9BACI/1-61                   ME-NYRFTAFEKTGETLFDETWTFENDEAAKLNGQQQIEEKGVANKTHRLVNASGKLILFH
A6CRM8_9BACI/31-91                  MK-VYKLTVFEQTGESIYEDSFEAPSDDEAKKIGKAILEEKGYADHTHRCASPLGKLILFH
A9VI34_BACWK/1-61                   MG-VYVLTVFEKDGSKALDESFEAATEKEAKAKGESILQEKGLYEKTHRCTSSAGKLVLFQ
B1YK82_EXIS2/1-59                   M--LYTITAFSDRGETLLDDTFDASSDAEARQEGIRRLKEADLEHRGARVTRS-GQLIHFE
B4AFP2_BACPU/1-62                   MEKTYFLTVFDPSGETLLNEKITTDSDEKAKELGRHRLIEQQYTKHSHRLVDDAGKLLLFE
B7GF11_ANOFW/1-61                   MK-TYTLTVFEKTGEKLLDETFTAANDDEAKRIGEQKLKEKQFEHKTHRCTTSSGKLILFH
C4L3M3_EXISA/1-60                   ME-TYTVTGFENDGTLVLNEMFEASDDQSAKQKGLDMLRAAGHEHKGARIVRR-GQLIYFE
D3FVC7_BACPE/1-60                   MN-EYFLTVYEPNGEMVFEERIEAADDDAAQEIGKKKLEENNYTNHTHRLTRA-GKLLLFH
E8SV31_GEOS2/1-61                   MP-MYTLTAFERNGEKLLDETFEAANDEEAKKIGEQKLRERGCWEKTHRCVNASGKLILFH
Q2B187_9BACI/1-61                   MK-TYKLTAFENDGEKILDESFQAGSDDEAKEIGGNLLNEKGLSGKTHRCTSPLGKLLLFH
Q5WHU9_BACSK/1-59                   M--VYYLTAFQKDSSEVLNERFEAATDDEAIRTATLRLKEAQAEKLTHRLTRS-GKLLLFC
Q65LU1_BACLD/1-61                   ME-NYYVTVFDTSGETLLNERFEAADDEEAKEKGRGMLKEKQFLEHTHRVVHSSGKIIVFR
Q8CUH0_OCEIH/1-61                   MR-TYALTVFSKTGEKLLDTSFTAENDASAKEIGQAQLEEEGYTEHTHRCVSPDAKLVLFH
Q9KDP9_BACHD/1-59                   M--NYFLTVYDPTGEKLLDEQLEASSDAEAKELGELKLKEHGYEEHTHRMIRS-GKLLLFH
YHZD_BACSU/1-61                     MA-DYFLTVFDPSGNTLVNEQFEAEHEEAAKTHGEALLKEKELHSHTHRLVNAAGKLILFH


A3I3N7_9BACI/1-61                   V
A6CRM8_9BACI/31-91                  A
A9VI34_BACWK/1-61                   R
B1YK82_EXIS2/1-59                   R
B4AFP2_BACPU/1-62                   R
B7GF11_ANOFW/1-61                   R
C4L3M3_EXISA/1-60                   R
D3FVC7_BACPE/1-60                   V
E8SV31_GEOS2/1-61                   R
Q2B187_9BACI/1-61                   P
Q5WHU9_BACSK/1-59                   R
Q65LU1_BACLD/1-61                   S
Q8CUH0_OCEIH/1-61                   R
Q9KDP9_BACHD/1-59                   R
YHZD_BACSU/1-61                     R