The sequences which have been used as reference for the generation of profiles for the family YbaJ are highlighted in red. The profiles and the reference sequences for this family are given in a tar zipped format (Profiles are in ASN.1 format).

Download the tar zipped file.
Click here for help on generation of RPS-BLAST databases from the files given in above link

A1JNI8_YERE8/1-122                  MDEYSPKRHDVAQLKFLCESLYDEGIATLGDSHHGWVNDPTSAVNLQLNDLIEHIASFVMS
Q2NV68_SODGM/1-119                  MDEYSPKRYDIAQLKYLCENLYDEGIASLGNSYHGWVNDPSSAVNLQLNELIEHIAANIVI
Q325D5_SHIBS/1-122                  MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNYGWVNDPTSAINLQLNELIEHIATFALN
Q6D809_ERWCT/1-122                  MDEYTPKHYDIAQLRFLCENLCDESIATLGDSSHGWVNDPTSAINLQLNELIEHIATFILT


A1JNI8_YERE8/1-122                  FKIKYPDGGDLSELVEEYLDDTYTLFSSYGINDPELQRWQKTKERLFRLFSGEYICTLMKT
Q2NV68_SODGM/1-119                  FKLKYHNESELTDQAETFLDDTFTLFSSYGINNYDIQRWRRSRRRLFGTFSETELCT---T
Q325D5_SHIBS/1-122                  YKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPASL
Q6D809_ERWCT/1-122                  FKIKYPNESELSEQVEKYLDDTYVLFSNYGINDAELRRWQKSKAKLFGMFSGENICTPAKT