The sequences which have been used as reference for the generation of profiles for the family Mito_fiss_reg are highlighted in red. The profiles and the reference sequences for this family are given in a tar zipped format (Profiles are in ASN.1 format).

Download the tar zipped file.
Click here for help on generation of RPS-BLAST databases from the files given in above link

FA54A_BOVIN/37-301                  QILHI-WENKDYGSARSIVRIIGKLLPLEPCPRPNFELV--PLLNSVDPANCGSV--VPSF
FA54A_DANRE/24-257                  MLVPV-WESTHCGQYRSLVRMIGTNLPLSPYPRLRFQIPLQTFNKHSHIDVSVDSPAIPTL
FA54A_HUMAN/21-286                  QVLLI-WENKDYGSTRSIVRIIGKMLPLEPCRRPNFELI--PLLNSVDSDNCGSM--VPSF
FA54A_MOUSE/38-299                  QDLLI-CQNKNCGSARSIVRIIGRRLPLKPCRRPHFELI--PHVNSTESDDYELR--VPSF
FA54B_DANRE/5-270                   AEVIPIWQNKPHGSTRSVVRRIGSTLPLKPCPRACFQEL--PGLPSMRSLDGPL---VPTL
FA54B_HUMAN/8-255                   VTIPI-WQNKPHGAARSVVRRIGTNLPLKPCARASFETL--PNISDLCLRDVPP---VPTL
FA54B_MOUSE/5-252                   VTIPI-WQNKPHGAARSVVRRIGTNLPLKPCPRASFETL--PNISDLCLKDVPP---VPTL
FA54B_XENTR/37-280                  TKIVPVWENKPCGSSRSLVRRIGSHLPLKPCTRACFEAL--PPASNLYLTDTPM---VPTL
MTFR1_CHICK/20-256                  MESVL-WSSKPYGSSRSIVRKIGTNLSLIQCPRVQFQLT--SQAAEGNHPHQFREDAVASF
MTFR1_DANRE/10-241                  MDLAVGSSSKHYGSSRSIVRRIATNLPLAPCPRVHFQLH--PFASGASFLNSPNGPNVATL
MTFR1_HUMAN/20-251                  MQSVL-WSRKPYGSSRSIVRKIGTNLSLIQCPRVQFQIN--SHATEWSPSHPGED-AVASF
Q0P4U6_XENTR/55-306                 IER---LECKEYGWTRSAVRVIGTLLPLAPPPRPFFQHVTGPYAVEGKSDGAVCRPGIPSL
Q3SZL7_BOVIN/19-255                 MQSVL-WSGKPYGSSRSIVRKIGTNLSLIQCPRVQFQLT--SPTTEWSSSPSGED-AVVSF
Q3TTQ5_MOUSE/20-249                 MQSVL-WSGKPYGSSRSIVRKIGTNLSLIQCPRVQFQLT--SHATEWSPAHSGED-AVASF
Q5PPW4_XENLA/20-253                 MESAL-RSGKPYGSSRSIVRKIGSNLSLIQSPRVHFQLI--PYPVEINAQNGNT---IASF


FA54A_BOVIN/37-301                  ADVWCVANDEEASYLRFR--TWKNEEEEKIASFHPLQ--LFEGPLTPAVRRNKPRKN----
FA54A_DANRE/24-257                  ADVLWLVEDEGDSHTKFRNAVPLR------------KKCVPHGYETPSLGSVSVKAQRGGG
FA54A_HUMAN/21-286                  ADILYVANDEEASYLRFRNSIWKN-EEEKVEIFHPLR--LVRDPLSPAVRQKETVKN----
FA54A_MOUSE/38-299                  ADVLCVANDEEASCLRFRHSLWQKKEERKIAPFYPSK--LTWDPSSPGLRQNKTETD----
FA54B_DANRE/5-270                   ADIAWIADDEEETYARVRSDTRPLRHEWRPTPLLVMH----RNSSVPNFRREGRRVEG---
FA54B_HUMAN/8-255                   ADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQ----RNASVPNLRGSEERLLA---
FA54B_MOUSE/5-252                   ADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQ----RNASVPNLRGSEERLLA---
FA54B_XENTR/37-280                  ADVKWLAADEDETYARVRSDTRPLKHKWRPSPLLVMQ----RNSSVPNLKMKEEKMFC---
MTFR1_CHICK/20-256                  ADVGWVAQEEGEVSTRLRSEVWSKTAQPLPGELHQPGHSLGRQDSVPNLLHEEPAPRS---
MTFR1_DANRE/10-241                  ADVAWIDREESDGPGRIRCEADSG-LVFRTQERRPLR----RQRSLPSLHQVEPAQQS---
MTFR1_HUMAN/20-251                  ADVGWVAKEEGECSARLRTEVRSR--PPLQDDLLFFEKAPSRQISLPDLSQEEPQLKT---
Q0P4U6_XENTR/55-306                 GDVNCLTDDDVYSYTRFRHDLPGNRSREIKSIAPSFKRNLSWEPMILNRVPDK--------
Q3SZL7_BOVIN/19-255                 ADVGWVAEEEGECSTRQRIEVRSR--PTLQDDLPFFEKPHSRQPSLPTLSPEEPPLQT---
Q3TTQ5_MOUSE/20-249                 ADVGLVATEEGECSIRLRAEVSSK--PPHEDDPPCFEKPPSRHTSFPSLSQDKPSPE----
Q5PPW4_XENLA/20-253                 ADVGWVAKDEGESFARLRSEIRPNQNTPVLPEPVPMEQPLIRQTSLPVLAEEEVKAQG---


FA54A_BOVIN/37-301                  --DWPESETAIKKIAALEDELAFLRSQIAAIVGRQELGNSTKAGFLDLNGRPSGFGQKPS-
FA54A_DANRE/24-257                  VLAQSTQPDALLKISALEEELQRLRAQIATIITAPAGPVVSPT------------------
FA54A_HUMAN/21-286                  --DLPVNEAAIRKIAALENELTFLRSQIAAIVEMQELKNSTNSSSFGLSDERISLGQLSS-
FA54A_MOUSE/38-299                  --DLPVNEAAIKKIAALEDELTFLRSQIAAIVAMQDLRESRETGFIDLSDEQV----PPS-
FA54B_DANRE/5-270                   --LRKPGVTALNRTTALQDELSRLRAQIAKIVAADSDSNPITPDLLSPDDTSMGFSMAPFE
FA54B_HUMAN/8-255                   --LKKPALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFG
FA54B_MOUSE/5-252                   --LKKPALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFFSSGSSNVSSPLPCFG
FA54B_XENTR/37-280                  --LKKPGL-SLNRSSDIQEELSILRSQIARIVAGDSASSCLGSDSIP-VNVDLEASLPDYG
MTFR1_CHICK/20-256                  --TVIANEEAMQKISALENELATLRAQIAKIVILQEQQNLTAAGL------------SPV-
MTFR1_DANRE/10-241                  --QTVINDEAIQKISVLETELAKLRAQIAQIVQAQEQSAQSTAP-----------------
MTFR1_HUMAN/20-251                  --PALANEEALQKICALENELAALRAQIAKIVTQQEQQNLTAGDL------------DST-
Q0P4U6_XENTR/55-306                 --SVPSSENAIQKIAALEDELLQLRAQIAAIVAVQENKSMQSCSETLSSFGSPTPDYPQP-
Q3SZL7_BOVIN/19-255                 --STLANEEALQKICALESELAALRAQIAKIVTLQEQQNLSAGDL------------ESTR
Q3TTQ5_MOUSE/20-249                 --RTLASEEALQKISALENELAALRAQIAKIVTLQEQQSPSAGCL------------DSS-
Q5PPW4_XENLA/20-253                 ----VANKDAMQKISALESELANLRAQIAKIVTFQEQQSLTGSS-------------TST-


FA54A_BOVIN/37-301                  ----S---GATQLNVKQDSFSSSVRP----------SSPPPPSPPQISSVQPPCSPLMKIA
FA54A_DANRE/24-257                  --------DPGTPCSAPKPAPVLTSTP-------VCPPPPPPPPPPAMPTRTEVSMS----
FA54A_HUMAN/21-286                  ----S---RAAHLSVDPDQLPGSVLS----------PPPPPPLPPQFSSLQPPCFPPVQPG
FA54A_MOUSE/38-299                  ----S---ATTGLSVEPDHAPSVVLP----------PPPPPPPPPQF-SLQPPSSLPMQPG
FA54B_DANRE/5-270                   TAAYQPPPTASFVISDVTEEDEEEEEEEDREEEEEDVSELVPDPMPPVSMTASAT------
FA54B_HUMAN/8-255                   SSFHS---TTSFVISDITEETEVEVP----------E-------LPSVPLLCSASPE----
FA54B_MOUSE/5-252                   SSLHS---TTSFVISDITEETEVEVP----------E-------LPTVPLLCSASPE----
FA54B_XENTR/37-280                  PSYQS---TTSFVISDITEEDELDVS---------E--------YSSASLVDSTISL----
MTFR1_CHICK/20-256                  ----A---SAAVPCVPP---P---------------PPPPPPPPLPPPALQQSMSAI----
MTFR1_DANRE/10-241                  --------APGGPPVPP---PMVPVP----------PPPPPPPPCPTPSMQRSYSAI----
MTFR1_HUMAN/20-251                  ----T---FGTIP--PH---P---------------PPPPPPLPPPALGLHQSTSAV----
Q0P4U6_XENTR/55-306                 ----S---LTSTPLSGQILQPVTPAP---------PPPPPPPPPPPPAKVNSGESAI----
Q3SZL7_BOVIN/19-255                 PAAAA---APSVP--PA---P---------------PLPPPPPPLPSPGLQQSTSAI----
Q3TTQ5_MOUSE/20-249                 ----T---SVTVA--PP---P---------------PPPPPPPPLP-LVLHQSTSAL----
Q5PPW4_XENLA/20-253                 ----D---SGSLSTPPPSAAP---------------PPPPPPPPPPPPGLQKSVSAI----


FA54A_BOVIN/37-301                  SNSICASDNSTTEVKQ--QHPDAGKTNYSHHSKNQKNEAVPNMLDVLKDMNKVKLR
FA54A_DANRE/24-257                  --------EMIQQRQA-----AKKETLAQCGPSL---TTAPSMLEVLRDLNQVKLR
FA54A_HUMAN/21-286                  SNNICDSDNPATEMSK--QNPAANKTNYSHHSKSQRNKDIPNMLDVLKDMNKVKLR
FA54A_MOUSE/38-299                  SANTHDIDSLATEMER--QLSGVKKTDDSHHSKSQRLRDVPNMLDVLKDVNKVRLR
FA54B_DANRE/5-270                   ---------FDLDRPTMDFREPEEDTVSLSKSTS-----FADVMDMLKDMNRLKMS
FA54B_HUMAN/8-255                   --------CCKPEHKAACSSSEEDDCVSLSKASS-----FADMMGILKDFHRMKQS
FA54B_MOUSE/5-252                   --------CCKPEHKTTCSSSEEDDCISLSKASS-----FADMMGILKDFHRIKQS
FA54B_XENTR/37-280                  --------QRQVESNM---SDDDEDSLCLSKSNS-----FADMMGILKDIHKMKLN
MTFR1_CHICK/20-256                  --------ELIRERKN--RKTNSGPIPTENGPKK---PEIPNMLEILKDMNSVKLR
MTFR1_DANRE/10-241                  --------DLIRERRG---KKAEQNTVLDSAPKK---PELPNMLDVLKDMGKVKLR
MTFR1_HUMAN/20-251                  --------DLIKERRE--KRANAGKTLVKNNPKK---PEMPNMLEILKEMNSVKLR
Q0P4U6_XENTR/55-306                 --------ELIKKRKGVHKRSPRERAMVDNTNNP------PSMMDVLKGMNSVRLR
Q3SZL7_BOVIN/19-255                 --------DLIKERRR--RNASAGKTPVKNSPKK---TDLPNMLEILKDMNSVKLR
Q3TTQ5_MOUSE/20-249                 --------DLIKERRE--QRLSAGKTLATGHPKK---PDMPNMLEILKDMNSVKLR
Q5PPW4_XENLA/20-253                 --------DLIKERKG--KKTSTDISLTDSAPKK---PEMPSMLDVLKDMNRVKLR