The sequences which have been used as reference for the generation of profiles for the family 6PF2K are highlighted in red. The profiles and the reference sequences for this family are given in a tar zipped format (Profiles are in ASN.1 format).

Download the tar zipped file.
Click here for help on generation of RPS-BLAST databases from the files given in above link

6P21_YEAST/171-396                  PDGLISKEDSGSKLVIVMVGLPATGKSFITNKLSRFLN----YSLYYCKVFNVGNTRRKFA
6P22_YEAST/84-324                   NADPTYTNGKVNKFMIVLIGLPATGKSTISSHLIQCLKNNPLTNSLRCKVFNAGKIRRQIS
F261_RAT/30-251                     RRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLN----WIGTPTKVFNLGQYRREAV
F262_BOVIN/27-250                   KKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLN----WIGVPTKVFNLGVYRRQAV
F263_HUMAN/24-246                   PR-SCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLN----WIGVPTKVFNVGEYRREAV
F264_RAT/30-249                     QRGVCMTN---CPTLIVMVGLPARGKTYISKKLTRYLN----WIGVPTREFNVGQYRRDMV
F26L_CHICK/28-250                   RRGSTVPQFTNCPTMVILVGLRRPGKTYISRKLTRYLN----WIGMPTRVFNVGQYRREAV
F26_CAEEL/23-245                    SDQVRVPN------VIVMVGLPARGKTYISKKLCRYLK----WTGFTTKVFNVGEYRRSDA
F26_YEAST/1-224                     MGYSTISNDNDIKVCVIMVGLPARGKSFISQKIIRYLS----WLSIKAKCFNVGNYRRDVS
O64983_SPIOL/337-556                ADQMLGPK-EDRHLAIVLVGLPARGKTFTAAKLTRYLR----WLGHDTKHFNVGKYRRLKL
YL345_YEAST/71-291                  YSTDSGNLFHAGRILVVLVGLPATSKTLLSVAITRYTR----WLGVRTKSFHFSEYKESAK


6P21_YEAST/171-396                  KEHG---LKDQDSKFFEPKNADSTRLRDKWAMDTLDELLDYLLEGSGSVGIFDATNTSRER
6P22_YEAST/84-324                   CATISKPLLLSNTSSEDLFNPKNNDKKETYARITLQKLFHEINNDECDVGIFDATNSTIER
F261_RAT/30-251                     SY--------RNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRER
F262_BOVIN/27-250                   KS-------YKSYDFFRHDNEEAMKIRKQCALVALKDVKAYLTEESGQIAVFDATNTTRER
F263_HUMAN/24-246                   KQ-------YSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRER
F264_RAT/30-249                     KT-------YKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRER
F26L_CHICK/28-250                   QS-------YKNYEFFRHDNEEAMQIRRQCALAALQDVRTYLSSEEGQVAVFDATNTTRER
F26_CAEEL/23-245                    NAAD--AIHGANASFFSPNNADALKVRAESARRAMEDMADYLNSGTGGVAIFDATNTTKDR
F26_YEAST/1-224                     GN------VPMDAEFFNFENTDNFKLRELAAQNAIKDIVNFFTKEDGSVAVFDATNSTRKR
O64983_SPIOL/337-556                GT-------NQSAEFFRGDNTEGIEARNEVAALAMEDMISWMQ-EGGQVGIFDATNSTRER
YL345_YEAST/71-291                  NI-------PSDYFCVVPTSKEGVAFVEKLRMQMLNDILAFFNDLSGQLAIYDALNIRKID


6P21_YEAST/171-396                  RKNVLARIRKRSP------HLKVLFLESVCSDHALVQKNIRLKLFG-PDYKGKDPES-SLK
6P22_YEAST/84-324                   RRFIFEEVCSFNTDELSSFNLVPIILQVSCFNRSFIKYNIHNKSFN-EDYLDKPYEL-AIK
F261_RAT/30-251                     RSLILQFAKEHG--------YKVFFIESICNDPEIIAENIKQVKLGSPDYIDCDQEK-VLE
F262_BOVIN/27-250                   RDLILNFAEENS--------FKVFFVESVCDDPDVIAANILEVKVSSPDYPERNREN-VMD
F263_HUMAN/24-246                   RHMILHFAKEND--------FKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAE-AMD
F264_RAT/30-249                     RAMIFNFGEQNG--------YKTFFVESICVDPEVIAANIVQVKLGSPDYVNRDSDE-ATE
F26L_CHICK/28-250                   RALIMQFARENG--------YKVLFVESICDDPAIIEENIKQVKLSSPDYKGCTPEE-AVA
F26_CAEEL/23-245                    RRIIIDFCKKQR--------LRCFFIESVCDDPAIIDCNVTDVKVNSPDYKGLMTAEQAKE
F26_YEAST/1-224                     RKWLKDICEKNN--------IQPMFLESWSNDHELIINNAKDIGSTSPDYENSEPHV-AEA
O64983_SPIOL/337-556                RNMLMKLAEGN---------CKIIFLETLCYDERIIERNIRLKVQQSPDYAEQPDFEAGYR
YL345_YEAST/71-291                  RKNLETTFSEIG--------VKVLFIESIVSDQEIMNRNIALALES-NDYKGLSTDE-AID


6P21_YEAST/171-396                  DFKSRLANYLKAYEPIE---DDENLQYIKMID-VGKKVIAYNIQGFLASQTVYYLLNFNLA
6P22_YEAST/84-324                   DFAKRLKHYYSQFTPFSLDEFNQIHRYISQHEEIDTSLFFFNVIN--AGVVEPHSLNQSHY
F261_RAT/30-251                     DFLKRIECYEINYQPLD-EELDSHLSYIKIFD-VGTRYMVNRVQDHVQSRTAYYLMNIHVT
F262_BOVIN/27-250                   DFLKRIECYKVTYQPLDPDSHDKDLSFIKVIN-VGQRFLVNKVQDYIQSKIVYYLMNIHVH
F263_HUMAN/24-246                   DFMKRISCYEASYQPLDPDKCDRDLSLIKVID-VGRRFLVNRVQDHIQSRIVYYLMNIHVQ
F264_RAT/30-249                     DFMRRIECYENSYESLD-EEQDRDLSYIKIMD-VGQSYVVNRVADHIQSRIVYYLMNIHVT
F26L_CHICK/28-250                   DFLQRIECYKATYEPLD-EQLDSGLSYIKIFD-VGVRYLANRVQGHVQSRTVYYLMNTHVT
F26_CAEEL/23-245                    DFMNRIENYKKQYEPLD-ESEDESLSFIKVIN-AGRSFKVHQVRGHVQSRVVYFLMNIHLL
F26_YEAST/1-224                     DFLERIRQYERFYEPLD-PQKDKDMTFIKLVN-IIEEVVINKIRTYLESRIVFYVMNIRPK
O64983_SPIOL/337-556                DFKRRLDNYEKVYEPVE---EGSYIKMIDTVSGNGGQIQVNNISGYLPGRIVFFLVNTHLT
YL345_YEAST/71-291                  EYMRRLSVNEPYYEMMT---HDEELSYIKYINLGKQIIVKDNIHGYLVNKIVFFLMNLRQK


6P21_YEAST/171-396                  D
6P22_YEAST/84-324                   P
F261_RAT/30-251                     P
F262_BOVIN/27-250                   P
F263_HUMAN/24-246                   P
F264_RAT/30-249                     P
F26L_CHICK/28-250                   P
F26_CAEEL/23-245                    P
F26_YEAST/1-224                     P
O64983_SPIOL/337-556                P
YL345_YEAST/71-291                  K