The sequences which have been used as reference for the generation of profiles for the family 23S_rRNA_IVP are highlighted in red. The profiles and the reference sequences for this family are given in a tar zipped format (Profiles are in ASN.1 format).

Download the tar zipped file.
Click here for help on generation of RPS-BLAST databases from the files given in above link

A0LYS9_GRAFK/1-108                  MNHK---DLDVWKRSMDLVEEIYK-ITSNFPSS-EIYGLTNQLRRASVSIPSNIAEGASRK
A0M075_GRAFK/2-111                  HNFK---ELKIWQKAIKVAEQVYI-LSSRFPSE-EKYGLISQIRRSAISIPSNIAEGAGRN
A0M3T1_GRAFK/2-111                  HRFK---ELEIWKQSRVFCKDIYI-VIANFPKS-EKFGLISQLRRASVSIPSNISEGTSRI
A0M555_GRAFK/1-111                  MDFK---SLKAYVIAFELAMKIFE-ISKKFPKE-ETYSLTDQIRRSSRSVCSNIAEAYRKR
A0M634_GRAFK/7-116                  ENFE---DLEIWKMAREVCNDIFK-IREESPLK-TDYRLYDQINASSGSIMDNIAEGFERN
A0M6C7_GRAFK/2-111                  VDYR---NYTVWKKAHALVLDIYK-TTRNLPSE-EKFNLISQMNRAALSVPTNIVEGCGRE
A0YI03_LYNSP/3-113                  NNHE---DLQVYQMAFDAAMNIFE-LSKKFPQE-EKYSLTDQIRRSSRSVCANLAEAWRRR
A0YV26_LYNSP/2-112                  ESYK---ELMVWQKAIELVVKVYQ-ITKTFPQQ-ERYALTSQIQRAVTSIPANIAEGWGRG
A0YW91_LYNSP/5-114                  QSHR---DLIVWQKSMDMVVQVYQ-LSTHFPST-EIYRLTAQITRSAASVPANIAEGHARG
A0YY18_LYNSP/5-114                  NDFK---DLRIWQKGMDIAEQCYF-LTKLFPKD-ELYGMVQQIRRSAASIPANIAEGYGRR
A0ZCH9_NODSP/7-117                  KSHE---DLEVYKMAFDVAMKIFE-LSKKFPVE-EKYSLIDQIRRSSRSVCANLAEAWRKR
A0ZGB3_NODSP/2-111                  TDFR---ELQEWEKAHELTIAVYE-ITKTFPEE-ELQGLTQQIRLACAAIPIKIAQGCDRD
A0ZJI8_NODSP/4-113                  RRFQ---ELRVYQLSEKLADDIWK-IVNNWQPL-AQGTLGKQIIRSADSIGANIAEGVGRG
A1BJM0_CHLPD/4-113                  EKFE---DLIAWQKARELTKAIYH-VTAEGQFS-KDFGLRDQIRRASVSVMSNISEGFERS
A1BJP6_CHLPD/1-110                  MTYK---DLIVWQKADAFAHQVYL-KTRSFPKD-ELFGITSQIRRAALSVPTNIVEGYARK
A1HRG8_9FIRM/8-114                  RGFR---DLRVWQQAIMLAAEVMK-IAASLPQH-ELYGLGNQMRRSAISVSSNIAEGWGRR
A1S7W2_SHEAM/1-107                  MRFE---QLDVWKRASRLACDVYK-ALKD---C-RDYGLKDQMTRAAVSIPSNIAEGEERE
A1ST26_PSYIN/1-107                  MNFE---KLDVWKKSARLSAELYK-ATAD---L-RDYGFRDQLTRSGLSVPSNIAEGMTRS
A2U030_9FLAO/18-127                 RDFR---KYDIWTDSMELVDAIYT-FVEAFPNS-EKYGLSSQITRSAVSIPSNIAEGASRN
A2U0Y1_9FLAO/2-111                  RNFR---KLKIWSQGIIIVKEIYK-VAKKLPDD-EKFGLKSQITRAAVSIPSNIAEGSSRN
A3DEL3_CLOTH/8-117                  KDFK---TLKVWQKANVLEQEIGE-LVKGFPSY-EQYRLTDQLVRAVRSIGANIAEGNTQL
A3HRF7_9BACT/2-112                  SSYK---DLDIYQISLSLFLKTHP-FTLKLPKH-ELYELGNQLRRSSDSVNTNIVEGYGRR
A3HUI0_9BACT/2-111                  HNFK---ELKVWQKSVDFAVKVYS-ATKDFPME-EKFGLVSQMRRAGVSIPSNIAEGCAKT
A3HZI0_9BACT/5-114                  DRFE---DLNVWNHAIEIGLKIYQ-LVESNHLV-RDYRAKDQLIGAAISISNNIAEGFEYN
A3I206_9BACT/4-113                  HRYE---DLEVYKKSVDLAVLVSL-RTRKYPDF-EKFSLVSQTNRAVYSISNNIAEGAGRG
A3J3H7_9FLAO/1-111                  MDFK---ELLAYQKAFSLAMEIKK-VSDSFPKE-EKYALTDQVRRSSRSVCANIAEAYRKR
A3J705_9FLAO/1-111                  MIYQ---DLLAYKKGFEVAMEIFE-VSKSFPKE-ETYSLTDQIRRSSRSVCANIAESYRKR
A3J726_9FLAO/5-114                  EKFE---DLEIWNKSREICIDIET-FFETTNLG-KRFSMKDQMDRSSGSIMDNIAEGFERN
A3WMT7_9GAMM/1-107                  MNYQ---KLWLWQHSLDIAIDI----METFQHS-KNFSFKDQVFRSAISIPSNIAEAMTRD
A3XJS8_LEEBM/1-111                  MGVE---DLLAYQKAFDLAMDVFD-ISKAFPRE-EQYSLTDQIRRSSRAVCANMSESYRKQ
A3XMC1_LEEBM/2-112                  HNFQ---ELKIWQKAMDIAESTYL-ISAEFPKE-EKFGLTSQIRRSAVSIPSNIAEGAGRN
A3XQJ4_LEEBM/5-114                  NSFE---ELEIFKKARVLANNVWK-LIQTSNLK-QDFELINQINASSGSVMDNIAEGFGRG
A3XQX2_LEEBM/5-114                  EKFE---DLEVWQLSRDLCQKIEA-LIASDELS-RRYALKDQIDRSSGSIMDNIAEGFGRS
A3XR63_LEEBM/3-113                  GNFE---ELECWKECFRLKEYVRKDILIQLPEI-ERFELYSQLLRAARSTTANIAEGWGRH
A4BEN9_9GAMM/1-95                   MNFE---KLDVWKLSAQLSSELYL-ELKD---L-KDYGSKDQMTRSGLSVPSNIAEGMSRE
A4BRU2_9GAMM/5-112                  TGHK---DLSVWQAAMELAKVIYA-MTADFPKE-ERYGLVSQMRRAAVSVPSNIAEGAGRG
A4J7I5_DESRM/3-112                  KDYH---DLEVYKRGYKLALQIHK-TTKGFPQH-ELYEIGSQIRRAAVSIPLNIAEGYGRK
A4Y8I0_SHEPC/1-107                  MRFE---QLDVWKRASRLSCQIYR-VTES---V-SNWGFKDQITRSGLSVPSNIAEGEERE
A5FA45_FLAJ1/2-111                  KTFR---DLLIWQKSMNLVTEIYL-LTNSFPKE-EIYGLSSQIRRCSISIPSNIAEGYGRD
A5FAL8_FLAJ1/2-111                  HQFE---KLKIWQKAMDITENVYK-VCSELPSD-EKFNLISQIKRCAVSIPSNIAEGSGRN
A5FHM6_FLAJ1/5-114                  EKFE---DLEIWRLAREICQQIEF-LIQNTNLK-TNYSLKDQIDRSSGSVMDNIAEGFERN
A5FIT5_FLAJ1/2-111                  RDFK---KYDIWQLRHSFTLEIYK-ITSLFPKE-ELYGLTSQIRRACSSIPTNISEGCGRN
A5FKQ5_FLAJ1/5-114                  KSFE---EINSWQKSRIFNKKIYL-ITENSNFK-KDFDFVRQIRRASLSISSNIAEGFERN
A5FLY9_FLAJ1/5-115                  KSYK---ELFIWQKGIKLVVLVYK-LTKNFPKE-EIYALTSQLKRASVSIPSNIAEGFGRQ
A5G6F5_GEOUR/8-113                  NRFE---DIESWKEARLLVADVYK-LSCC-----NDRGFNGQIQRAAISVMSNIAEGFERG
A5G849_GEOUR/7-112                  KTHK---DLHVWQKAMDLVVDVYE-ITYRLPQS-ELYGLTSQIRRSAVSIPSNIAEGAGRN
A5G857_GEOUR/2-109                  KDHK---ELDAWKISMDLVVDVYA-ISKDFPKD-ELYGLTSQLRRAAVSIPSNISEGAARN
A5G861_GEOUR/6-113                  RDYK---ELDVWQRSVNLAVSVYG-ILQKFPLD-EHFGLADQIKRSVVSIASNIAEGAGRQ
A5GBK5_GEOUR/5-114                  ERFE---EIQAWQKARLLVKEVYS-ISNTGGFV-KDFGLRDQIRRAAVSIMLNIAEGFARK
A5V1K7_ROSS1/5-114                  ERFE---DLEAWQRARELTNVIYD-MSDVGAFA-RDFALRDQIRRAAVSIMSNIAEGFESR
A6AWK3_VIBHA/5-111                  MKYQ---NLDVWKMSFTLCKHTYQ-AVEH---I-KDYAFKDQIRRSSLSVPSNIAEGIERG
A6DHG8_9BACT/1-107                  MNFE---DLEIWKRSVKLSIAIYK-ETLN---L-KDYGFKDQITRSSLSIPSNIAEGMLRD
A6DJ80_9BACT/4-110                  RSFE---ELNIWQSSQDLSVQIYA-LFKA---C-HDYGFKDQIQRAAVSVMNNIAEGFERE
A6DNX3_9BACT/1-107                  MKFE---DLEVWKTSVELSILVYK-QTKT---L-TDYGFKDQITRSALSIPSNIAEGFDRE
A6EMX2_9BACT/2-111                  RDFR---KYTIWELSHQLTLDVYN-ISNSYPKS-EIYGITSQLRRASSSIPTNIAEGCGRD
A6EP59_9BACT/2-111                  NKVE---DLIIWKKGMELAKLVYK-ISIELPND-EKFGLKSQIKRCSVSIPSNIAEGAGRN
A6ERZ8_9BACT/5-114                  HNFR---KLTIWKESRELVSITYR-MTKAFPKH-ETYGLSSQIQRCSISIASNIAEGSARN
A6GVU0_FLAPJ/5-115                  KSYK---DLLIWQKGIDIALLSYK-LIKDFPKE-ELYALSSQIKRCSISIASNIAEGYGRH
A6GYP0_FLAPJ/4-113                  YSFE---KLEVWVESKNFSKSIYL-VTSKFPDN-EKYGLISQLRRASISICSNIAEGSARN
A6H0B8_FLAPJ/2-111                  HNFE---KLKIWQKAMDIAVEVYE-VSTLLPND-EKFNLIHQIKKCAVSIPSNIAEGSGRN
A6KX83_BACV8/4-113                  QSFE---QLIVWQKAHSYVLAIYK-ITKQYPKE-ELFCLVNQMRRAAASITANIAEGYAKI
A6Q868_SULNB/1-107                  MRCE---RLDVWKRSCRLSVEVYK-NFAQ---C-KDFGFKDQITRSSLSIASNIAEGLEKE
A7BUG8_9GAMM/1-108                  MKFE---DLDVWKRSARLSADIYK-AMKN---NLKDFGFQNQITRAGLSIPSNIAEGYERE
A7C4I0_9GAMM/4-113                  PDFE---DLEVYKLAEKLANQIWY-IVKEWDYF-AKDTIGKQIVRAADSVCANIAEGRGRH
A7NJH7_ROSCS/13-123                 YTHR---NLILWNRAQQLALDVIT-IARRMPNTWSNAVIARQIIASATSIGANIAEGHGRY
A8FXJ2_SHESH/1-107                  MKYE---QLEVWQRSFKLSIKIYR-LFTN---S-RDYGFKDQICRSSISVPSNIAEGMERC
A8ZT12_DESOH/3-111                  LGHE---KLDVYRLAIRYVAWVYE-NAGHLNGV--HRSAREQWLRASQSIPLNIAEGNGKT
A9KVV0_SHEB9/1-107                  MKFQ---KLEVWQLSYELSSSIYI-ATKD---L-RDWGFRDQITRSGLSVPSNIAEGMERY
B0K7W4_THEP3/3-113                  KTYK---DLRIYQQSYKLSIEIHK-LTQNYPGY-ERYELGSQLRRAATSIPLNIAEGYGKK
B3EF74_CHLL2/4-113                  ERFE---DLIAWQKARELTKMIYQ-VTSDGLFS-KDYGLRDQIRRASVSVMSNLAEGYERG
B3ELY3_CHLPB/19-127                 KSFE---DLIVWQKAHEFVLSVYR-VTKDFPKE-EIFGLVSQFRRASVSVPANIAEGFGKK
B4S3Y9_PROA2/4-113                  EKFE---DLVAWQKARELTKEIYR-VSNDGAFS-RDFGLRDQIRRAAVSIMSNIAEGFGRG
B4S3Z1_PROA2/5-111                  ERFE---DLAVWQESLKLSIDVYQ-SLKD---C-KDFGLKNQMERSAVSVPSNIAEGYERD
B4S3Z5_PROA2/3-110                  KNHK---DLEVWRKSIDFAVDIYT-LTEKFPSV-EQYGLVSQLRRAAVSISSNIAEGAARN
B4S3Z7_PROA2/2-109                  LSHK---DLDVWKKSIDFAVQIYT-FTEAFPPE-EKYALASQLKRAGVSIASNISEGAARN
B5ED38_GEOBB/3-116                  RSFK---DMPVWQHAMAVAEQVYS-ATEHLPKK-EDYGLTSQIRRSALSISANIAEAYGRK
D1N3L8_9BACT/2-108                  KSFE---ELTVWKRSCRMTVELYK-SLRS---C-NDCGLKGQMTRAAVSIPSNIAEGAERR
Q07ZA4_SHEFN/1-107                  MRFE---LLDVWKRASRLSCEIYK-LADK---V-NNWGFKDQITRSGLSVPSNIAEGEERD
Q0EXY3_9PROT/2-111                  KSHK---DLDVWQKALDLSVEVYR-LTGSFPKD-EVYAMTSQMRRAAVSIASNIAEGAARR
Q0EZ86_9PROT/5-114                  ERFE---DIDAWKKARELTNEVYA-LTRLDDFS-RDYGLKDQIRRSSVSIMSNIAEGFERG
Q11QJ2_CYTH3/2-111                  KNYK---NLTVWQDSHELVPLVYK-ETKAFPRE-EVYGITSQLRRAAASIPANIAEGCAKN
Q1EI17_9ZZZZ/10-121                 SSFE---DLEVFKQAYRASLDVHR-ASLDFPAV-EQRALADQVRRASKSICANLAEGFARQ
Q1IID5_KORVE/2-111                  RDFR---TLAIWERAHRLTLGVYR-ETGGFPSS-ELYGLTSQTRRAAASIGANIAEGAGKD
Q1IZQ0_DEIGD/11-120                 DSVR---DLRIWQEEMDVVEHVYR-LTAEWPKA-EVYGLTSQARRAAVSIPANIAEGAGRG
Q1K405_DESAC/5-114                  RCFE---DLIAWQKARALARLIYG-IARETALA-RDFGLRDQIQRASVSVLSNIAEGFDRS
Q1PUP1_9BACT/638-747                KSYR---DLEVWQSSMDLAVECYN-LTKEIPQG-KNDALAGQLQRTAASIPATIAKGQAMQ
Q1PVU0_9BACT/11-124                 MKIESAKDLRVYQKAYALAMELFE-LSKEFHCE-ERFALTDQIRRSSRSVCANLREAWAKR
Q1Q1W9_9BACT/12-121                 STFE---TLEVWKKARELRKEISI-LTKALPSD-ERFRLADQLVRASRSVTANIAEGHGRY
Q1VSR7_9FLAO/4-113                  YSFE---KLKVWQKSKQWIIHLYK-LTEAFPRE-EKYGLVSQLRRASVSVSSNIAEGSSRK
Q1VUL9_9FLAO/4-114                  KSHK---DLNLWKESMNLVEDIYS-ISKSFPKE-EMYGLTSQMRRCAVSIPSNIAEGAGRK
Q1VZG5_9FLAO/5-113                  HNYK---NLTIWKLGLEIAFNISD-IIKKFPEI-ERFALSDQMNRCSISIPSNIAEGSAR-
Q21IS5_SACD2/1-107                  MKCE---SLEVWQRSTALCIEIYR-YFDA---C-ADYSFKDQITRSALSVPSNIAEGLERI
Q2BIS2_9GAMM/1-107                  MSFE---TLHVWKRACSLSCELYQ-HFSQ---C-TDFGFKDQITRSGLSIPSNIAEGFERG
Q2EXW5_VIBVU/4-110                  LGFE---RLEVWKKSSRLSVDIVK-ALHR---C-KNYALVDQITRSSLSIPSNISEGEERE
Q2S319_SALRD/1-110                  MDVD---DLAVYRRSLKLAEEIWA-EVEEWPSF-AKYSIGEQLVQAADSIAANISEGHGRY
Q2S5B2_SALRD/17-126                 ERFE---KLEVWKTARKLTNRVYK-HTQQEPFA-KDFGRRDQIQRASVSVMSNIAEGFESR
Q2YL20_BRUA2/4-113                  NSYR---DILVWQQAMELVTAIYK-STETWPRE-EIYGLTSQIRRAAVSIPANIAEGYGRD
Q39RL5_GEOMG/2-109                  RDHK---ELDVWKTGVELVTSVYV-ATQSFPKE-QLHGLTNQLRRAAVSIPSNIAEGAARQ
Q3A3M3_PELCD/4-113                  RRFE---ELRVYQLSEKLADDIWK-IVSEWDYM-AKDTVGKQLVRAVDSVGANIAEGTGRG
Q3A3N4_PELCD/2-111                  KHHK---QLEVWKRSVALAGAIYS-VTRGFPPE-EKYGLTSQMCRAAVSIASNIAEGAARQ
Q3AEW3_CARHZ/3-113                  YSFK---DLEVYQTSYNLALEIYK-IITTFPKY-EQYELASQFRRAVISIPLNIAEGFGRK
Q3IEI1_PSEHT/2-108                  MNFE---NLDVWKRSTRLSADIYK-NPTL---K-KDFGFRDQLTRSGLSVPSNIAEGMTRD
Q3M1L5_ANAVT/6-112                  KTFQ---DLIVWQKAHQFVLLVYQ-FTSQFPKS-EIYGLTSQFRRAAISIAANIAEGFKKK
Q3SL15_THIDA/2-111                  QNYR---DLKVWQSAMELAESVYR-ITGPFPSH-ETYGLTGQLRRAAVSIPSNLAEGHARS
Q48516_LEPBO/5-116                  RKYE---DLEVYRKSYLVSLEIHK-KTLEFPKE-EQYGLASQLRNSSKSICGNIAEGFGKQ
Q48876_9LEPT/5-116                  KSIE---DFDVFNRAYDLSLRIHK-FSLSLPRF-EQSDLANQLRRSSKSVCSNFAEGFAKQ
Q48877_9LEPT/5-116                  KSYE---RFEVFKRSFELSLKVHH-FSLSLPRF-EQSDLGNQLRRSSKSICSNFAEGFAKQ
Q48880_9LEPT/5-116                  KRIE---DFDVFNRAYALSLKIDK-ISLEMPKF-EQLDLANQLRRSSKSICSNFAEGFAKQ
Q4C1M4_CROWT/25-134                 RDFK---DLKVWQKGMIIAEKCYV-LIQKFPKE-EIYGMVQQIRRSATSIPANIAEGYGRR
Q4C886_CROWT/8-118                  KTHE---DLNVYQIAFDAAMDIFE-LSKMFPVE-ERYALSDQIRRSSRSVCANLAEAWRKR
Q4ZNW5_PSEU2/1-107                  MDFE---RLLVWQRAKALAVILYR-QTAS---C-PDLAFRSQITRSGLSVPSNIAEGMERF
Q549T3_COXBU/6-117                  SSFE---DLVVFQKAYKLSLKLHK-LTLSMPKE-EQYGLASQIRQASKSICANIAEGFGKQ
Q565U4_9BACT/6-115                  RSFR---DLDVWQLGKEIALDVYQ-TTKEFPRD-ELYGLVSQMRRAAVPIPSNIAEGFNRH
Q5E8I8_VIBF1/1-107                  MRFK---ELDVWKRSFKVSVYICK-SMRS---C-KDLGFKDQICRSSVSVPSNIAEGSERG
Q5E8J7_VIBF1/1-107                  MRCE---KLKVWKRACRLSCEIYK-TTSS---I-KDYGFRDQITRSGLSVPSNIAEGEERS
Q5H5F9_XANOR/16-123                 RPHE---RLTVWRDAMSLVEAIYR-RSHDFPDS-ERFGLTAQMRRAAISIPSNIAEGAARR
Q7MPM5_VIBVY/1-107                  MRYK---ELEIWKRSYQVVLQVYN-LLKT---C-RDYGLKDQISRSAVSVPSNIAEGSERG
Q7UI39_RHOBA/3-108                  STFE---DLEVWKRGCRLAVSVYE-LLAD---C-RDFGLKDQMQRSAVSVPSNIAEGYER-
Q8PD29_XANCP/9-118                  RPHE---RLDAWRDSMELVEMIYR-LTEVFPDQ-ERYGLTAQLRRAAVSIPSNIAEGAARR
Q8PQ01_XANAC/9-124                  RPHE---RLEAWRDSMELVEMIYR-FTDVFPEQ-ERYGLMAQLRRAAVSVPSNIAEGAARR
Q8XFQ4_NOSS1/1-110                  MSYR---NQFIWQRAVQLAINCYK-FTRLFPQS-ELYGLTSQIRRSSVSVASNIAEGYGRR
Q8YZC8_NOSS1/4-113                  RGFE---SLDFYQDSLRLLKAAYR-LADSLPDC-ERYNLSDQLRRAASSILLNIAEGYGRY


A0LYS9_GRAFK/1-108                  --GDKELLYFVNVAIGSIAEIETQLLISIRLKYINE-END--------IFESVIEVRKLLL
A0M075_GRAFK/2-111                  --TNGEFKNFLGIANGSTNELCTQLIISEHLKLISE-ENI------KPIINDLMEIQKMNF
A0M3T1_GRAFK/2-111                  --SSKDFSRYLEMAMGSCYEVETQILLSNDLGFLKD-TEL------IALQEKLTSIIKMIS
A0M555_GRAFK/1-111                  -NYPNHFKSKLTDSDSENAETQSWLHFAKECGYLTK-LEF------EESNLKSEEVGKILN
A0M634_GRAFK/7-116                  --GNREFIQFLSIAKASCGETRSQLYRIMDRKYIER-NEF------DVLLNKLKSLSMQIG
A0M6C7_GRAFK/2-111                  --TQKEFLRFLHISSGSAFELEYLILVCRDLKFIDI-ETS------EELMRQIAEIKRMLF
A0YI03_LYNSP/3-113                  -RYKGSFLARLNDAEAEAAETQVWLKFAVKCDYLEL-HKG------RELYSQYNQILGMIV
A0YV26_LYNSP/2-112                  --STKEYIHHLKISRGSLMELETHLIVAQRLQYILNLESL------KLIQQEIEVIGKMLN
A0YW91_LYNSP/5-114                  --SGKDYAHFLAIAKGSLMETETFLMLAVRLNYLSE-NQA------HPTLYLITEISKMLT
A0YY18_LYNSP/5-114                  --YTAEYVRFLNIAQGSVNELETHLILSRRVRLCEE-KDL------EMIVNLLKEESRMII
A0ZCH9_NODSP/7-117                  -RYEAAFVAKLSDSESEAAETQTWLKFAVKCNYLDV-ETG------RELYGAYNRILSILV
A0ZGB3_NODSP/2-111                  --DYEMQLDFLEMARDAVIEVEYYLLLCFELNMLDS-SDY------DLLISDVVEVKELLA
A0ZJI8_NODSP/4-113                  --SYQDNRRFVKIARGSLYETQHWLRRAYHRKLLTN-EQI------DALKLTINELAPQLN
A1BJM0_CHLPD/4-113                  --SLNEFHQFLVIAKASCAEVRSQLYVALDAGYINE-ITF------QELNQQATEVSRITG
A1BJP6_CHLPD/1-110                  --GDKELARFLNIAIGSLAETEYLLGFANRLGYIDT-TDF------KELETLKDDMSKALW
A1HRG8_9FIRM/8-114                  --GEKEFSRFLDIANGSLCELETQLEIAKICYNIDT----------LPLVNQCAAIRAQIV
A1S7W2_SHEAM/1-107                  --SQAESARFLYFAKGSAGELITQIYIAIEIGVIEK-QRG------MLLIKEVKELSAMIA
A1ST26_PSYIN/1-107                  --SKKEKCRFLEIARSSLAEARTQIYIGIDIGYLSS-TEG------KNWLEQTHHISMMIT
A2U030_9FLAO/18-127                 --SEKDFARFLEIGLGSAFELETQLIIAERRKYISE-SHL------EESIMKLTSLQKRIY
A2U0Y1_9FLAO/2-111                  --SEVEFKRFLEISIGSLFEVETQLIIIQELGLIRL-EEL------TPIFELIAEEGKVIN
A3DEL3_CLOTH/8-117                  --FIKRELFHANAALGSAGEVRNHLLTAHQSGYINK-EQY------DALDKKLIEIIKMLY
A3HRF7_9BACT/2-112                  -SYKNDFIKFLVYSEASCLETISHLEKIKVLYPYLS-QES------EDLLNNYNLLGGKIH
A3HUI0_9BACT/2-111                  --SGKSFVNSLEISLGESFELETQLIISERVGILDS-EKA------IEMEKELGEVQRMIT
A3HZI0_9BACT/5-114                  --SNRQFIKYLAIAKGSAGELRSQLFLLVKANKITE-KEY------EFLYQEMIQISSEIK
A3I206_9BACT/4-113                  --GNAEFRNFLHYSLGSLNEVENELLLAQKLGYLED-KEY------LDFKDRAEIIKKMLI
A3J3H7_9FLAO/1-111                  -RYINHFISKLTDSDGENSETSVWLDFALECNYLSK-EQH------IDMVVKSEEIGKLIN
A3J705_9FLAO/1-111                  -VYPKHFHSKLTDCDAENSETQTWLEFAYACKYINE-NIF------NELTEKNKEVGKLIN
A3J726_9FLAO/5-114                  --GNREFVNFLSFSKGSCGELKSQLYRALDKNLISQ-SEF------DNLSVKIELVKNKIG
A3WMT7_9GAMM/1-107                  --TPADRRRILYYAIGSCAELDTQLQIALRLKWIET-KQR------EQWRRALRQIYVGLH
A3XJS8_LEEBM/1-111                  -RYQKHFVSKLTDCDAENGETQTWLKFAKACNYISV-EMY------LATLEKSQEVGRLIN
A3XMC1_LEEBM/2-112                  --TDGEFKNFLGIASGSSNELYTQLILAQRLGLISEDEQL------SNILKELEEVQKMNY
A3XQJ4_LEEBM/5-114                  --GNKEFINFLGFAKGSCCETKSQLLRCLDRGYLGE-ETF------DELNQETQELIDQLG
A3XQX2_LEEBM/5-114                  --GSLEFRNFLGYAKGSCSELKSQIYRLYDKQLILQ-KDY------EDLIEQCDHINAKPG
A3XR63_LEEBM/3-113                  --HRKDSIRFMIIARGSVAEVLDHTIETRHCNYISS-EQL------LEIRKQTSTCLRLIN
A4BEN9_9GAMM/1-95                   --NVAERKRFLNIAYGSAAELKTQLWIGMKINYIDK-------------------VKENLG
A4BRU2_9GAMM/5-112                  --SAREFHQFLTIARGSLSELETQALLARDLGFMRQ-SDD--------LMAMITRIFQMIT
A4J7I5_DESRM/3-112                  -NYVDDFKRFLINALGSCNEVAVLLDMIKDLGYIS--DQY------EGFKEEYDYLGRQLN
A4Y8I0_SHEPC/1-107                  --TLKDQIRFLYYAKGSLGELVTQLYIGIEVGYLAR-EPA------LLMVQEAKELAKILG
A5FA45_FLAJ1/2-111                  --GNNDYLRFLNISISSLFEMQTQLEISFNLKYITE-NQF------NKINGESRELERMLS
A5FAL8_FLAJ1/2-111                  --SNNEFAHFLGIANGSTYELITQLMISKRLKLIAE-EKI------STIINELVEVSNMNF
A5FHM6_FLAJ1/5-114                  --GNREFINFLSIAKGSIGEVKSQSYRAFDKKLISE-EQH------LKLNEMAELVKNKIG
A5FIT5_FLAJ1/2-111                  --SDKEFNQFLNIALGSANETEYLLILAKDLQYLNN-EIA------EKQIEKINSIKSKIY
A5FKQ5_FLAJ1/5-114                  --TDKEFIYFLYVAKASAGEVRSQLYLAFDLEYIIK-EEF------EMLLESITEISKLLS
A5FLY9_FLAJ1/5-115                  --TDKSFNHFLNISRGSLNEIETQLIIAKELEFISD-ESL-----FNEIMFLIEEESKMIS
A5G6F5_GEOUR/8-113                  --SNREFTQYLIIARGSAAEVKSLAYAGMDIGYIST-DAF------RTVFGRCTKIIGLLN
A5G849_GEOUR/7-112                  --YGKEFIQFLYIALGSIAELETQLLLVQRLKFIET-IQL----------EKLYDVKKMLL
A5G857_GEOUR/2-109                  --SEKEFIQFLHVALGSAAEAETQLIIAQRLDFSGE-INQ--------LLAKIVTVKKLIS
A5G861_GEOUR/6-113                  --GNREFIRFLSIAGGSAAELETQLIVAQKLGYAVE-AET--------LLGETVVIRKQLN
A5GBK5_GEOUR/5-114                  --TNKEFIQYLVIAHGSAAEVQAALYVAFDQEYLSE-AEF------DKLYGSADNTSKMVL
A5V1K7_ROSS1/5-114                  --TSRLYIEHLGRAKASCGEVRSQLYLAYDRQYVSG-EVF------EQTLALAESVSRLTH
A6AWK3_VIBHA/5-111                  --SPRETAYFLNVAKGSTGELKTQILLAYEFKYISQ-SDR------DALCEKCERISRMLC
A6DHG8_9BACT/1-107                  --SVKETQHFLSYSKASCAELQTQIIIGKEVGFLKE-GFC------LSSYQECKELIQMIS
A6DJ80_9BACT/4-110                  --SKADFARFLLISKASSGEVRSMLYLANKLNYLTK-DQS------DGLITSYKKLSTSIQ
A6DNX3_9BACT/1-107                  --SNKETLYFLSVAKASCAELRTQIIIGEKVPFLNN-EFS------EYAKNETLKITTMLK
A6EMX2_9BACT/2-111                  --SDKEFNRFLTIAIGSANETEYLIILSKDLNYIDE-TNF------DNLLTQVNVIKRKIH
A6EP59_9BACT/2-111                  --SNKEFKYFLSIANGSAYELQTQLLLIGELELIEE-EKL------KPLIELCIEIQKMNY
A6ERZ8_9BACT/5-114                  --SNKHFVQYLETSLGSSFEWETQLICAYDLGYIEE-QVY------NKHILSIHKLQAMIS
A6GVU0_FLAPJ/5-115                  --STQSYIQFIKIARGSLCELETQLLIAQKLGFIKE-EEI-----FFELLNQITEESKMIN
A6GYP0_FLAPJ/4-113                  --SFKDKAHFTTMAFSSAVEVLNQLIICFEIEFISE-NEY------FKLRGDLESITNKLN
A6H0B8_FLAPJ/2-111                  --YDKEFIQFLGIANGSTFELITQLILAKRLKLVNE-DLI------QPIINQLVEVSNMNF
A6KX83_BACV8/4-113                  --SSKDKLRFYNISQGSLEETRNFIILSKDLGYITL-QDK------EQLGIQAAEISRLLN
A6Q868_SULNB/1-107                  --SDKEKVRFIEIARGSNAELITQTYIGIEIGYINK-ETG------LAWIKELNEISRMLI
A7BUG8_9GAMM/1-108                  --SDKECINFLSYAKGSCGELRTQIYIGIDIDYIEK-QIG------HHWLQETREISAMLM
A7C4I0_9GAMM/4-113                  --NYQDNKRFVKIARGSLYETVNWLRLAHNRRLLTN-EQV------VGLKPLLEELLPKLN
A7NJH7_ROSCS/13-123                 --TPGAHRNHLAIAKGSTAETDRWLDLLRRSGYLSE-EDE------ARLHSECQEIAAMLT
A8FXJ2_SHESH/1-107                  --SDKEKARFLSIAKGSVRELKTQVMIAKEIDYISG-DEC------SSLSNECEQISKMLG
A8ZT12_DESOH/3-111                  --AGADRRRYFEIARGSALECAAIQDVLVVGRGLQE-EES------RERKLELDRIVAMLS
A9KVV0_SHEB9/1-107                  --GAKEQIQFLYIAKASLAELITQAMIGKDIGYLEP-NYV------DELLIKTERLSAMLA
B0K7W4_THEP3/3-113                  -ESEADFKRYLKIALGSSNEIEVLLDLSYDLGYIDK-TLH------NELIEEYTALRKQIY
B3EF74_CHLL2/4-113                  --SKNEFHQFLVIAKASCAEVRSQLFVALDTGYLDQ-SIF------QKLESQAQEVSKIIG
B3ELY3_CHLPB/19-127                 --SKLDKLRYLNISQGSLEECRYYVLLSKDLGYLKV-SS-------EDMLNQVVDVSKLLT
B4S3Y9_PROA2/4-113                  --SMNEFHQFLVISKASCAEVQSQLYVALDAGYLDQ-TTF------RRLSDNANEVGRIIS
B4S3Z1_PROA2/5-111                  --SNNDYIRFLNISKASCGELRTQLYIAKAIGILPN-EVA------DTFIEQTRLISRMLY
B4S3Z5_PROA2/3-110                  --GEKEFIHFLHIALGSASEVETQLIIAERLHYIKT-DEL--------VVHELGGIQKMLM
B4S3Z7_PROA2/2-109                  --STKEYVRFLYVALGSASEIETQLIIAQKLGFGQH-HQE--------MMHELIDIQKMLM
B5ED38_GEOBB/3-116                  --HLLDKVNFYYHARGSLTETQSHLEYSKRVGYLKS-EEADS--LDDRLSQLYQEINKIVL
D1N3L8_9BACT/2-108                  --THKEFINFLAIAKGSAAELRTQIYIASEVGIMTR-EDC------RKFTEELKEISRMLQ
Q07ZA4_SHEFN/1-107                  --TTKEKIRFLYYAKGSLGELVTQLYIGVEAGFLDK-KAS------LILVNEAKELAKIIG
Q0EXY3_9PROT/2-111                  --TDKDFIHFLHTALGSASELDTQIEIVARVGLADK-EKI------QVLQSEVGVISKMLC
Q0EZ86_9PROT/5-114                  --GAKEFSRFLTIAKGSAGELRCQLYIATDQGYLDM-AQS------GKLISEVSEISRMIA
Q11QJ2_CYTH3/2-111                  --SDREFNRFLQIAMGSLNESEYFLFLSKELNYLAE-ANY------IKMSGQLDIIKAKLI
Q1EI17_9ZZZZ/10-121                 GVAPADFRRFIMIAMGSSDEMRVWSRYCLDLGYIDE-AKW------KCWRDEYQEISKMLQ
Q1IID5_KORVE/2-111                  --SNPEFLRFLQIASGSASELENHLLLARDLGFLVV-PVY------GRLSAELQDVRKMIT
Q1IZQ0_DEIGD/11-120                 --SPAELVRFSRIALGSAYELHTLVELSIRLQLTPL-PTA------SPLLSTLNVLTKRLN
Q1K405_DESAC/5-114                  --SPTEFHRFLVIAKGSCAEVRAQLYVAFDAQLIDA-TQF------GEAKALAEETSRVIS
Q1PUP1_9BACT/638-747                --NPKEFFNHLSIANGSIAELETYLQVAERLDYIDS-DSI------KQIKQKAETIAASIS
Q1PVU0_9BACT/11-124                 -RYPAHFVSKLTDCDGENSETDTWLDFARDCNYITD-KHH------KELTSICLEVGKMLG
Q1Q1W9_9BACT/12-121                 --HFQENIQFCRQARGSLYEVLDHLTVALDENYISE-EEF------NILKTKIFVVIKILN
Q1VSR7_9FLAO/4-113                  --TPKDQRRFYIISYSSMIEVLNQLLIAEELGYIKN-KDL------QKSRVRIDEILAMLD
Q1VUL9_9FLAO/4-114                  --GEKEFARFLYIALGSLSELETQFEISIRLNYIAN-EVD-----TQSTFEKIIYIRRMLA
Q1VZG5_9FLAO/5-113                  --SQKSFKYYVNIAMGSSFELVTQLIIAKHRAYITE-AEF------EMIEAKIEHFQRMAS
Q21IS5_SACD2/1-107                  --SDKEKARFLEIAKASASELATQIYIGIAISRITP-EVG------EQWRLEVKEIAAMLG
Q2BIS2_9GAMM/1-107                  --SEKDRKKFLYYAKGSAAELRTQIHIGKQVGFIPV-DLA------DKWYAEVFYIKKMLN
Q2EXW5_VIBVU/4-110                  --TAKESARFLYIAKGSCGEMITQLYIAIELGYLSK-EQG------MVFVQEAKHISVMLA
Q2S319_SALRD/1-110                  --HFGENRQFCYDARGSLQETITWLQKAKMRGLITD-ERY------EELSDELTEIRKMPN
Q2S5B2_SALRD/17-126                 --TQSIFVDHLGRARGSAGEVRAQLYVASDQGYLSD-AEF------EATYDLADKASRQLF
Q2YL20_BRUA2/4-113                  --TRGAYQQFLRIAQGSLKEMETHLLIAEQLGFIAK-ERA------EPIMAMGESIGKLLR
Q39RL5_GEOMG/2-109                  --TNREFVQFLYIALGSVAEVETQLIIADKLNYIAD-VTS--------VLNRIASLRKMLH
Q3A3M3_PELCD/4-113                  --SYQDNRRFVRIARGSLYEVRHWLRRAYNRGLLTE-DHI------LSTKLLLQELAPKLN
Q3A3N4_PELCD/2-111                  --TLKEFIHFLHISSGSASELDTQIEIAKLINMGHS-ENL------LKAQQDLSQISRMLK
Q3AEW3_CARHZ/3-113                  -RSILTFKSFILNSLGSCNEVLVLLDFAKDLNYLDE-NTY------QYFYKEYELLAKKIN
Q3IEI1_PSEHT/2-108                  --SDKEKVRFLDIARSSLAEARTQIYIAIDINYIES-DVG------RAWLNETFELSKMLT
Q3M1L5_ANAVT/6-112                  --GAADKVRFLNIAQGSLEECRYYLILSKDLDYGDI----------SGLMLQLEEVSRLLT
Q3SL15_THIDA/2-111                  --TTRDYLRFVGIAQGSLAEAETQIELVHRLGAVPT-DDL------RTMLEQTNELGRMLH
Q48516_LEPBO/5-116                  SQSKQEFRRFLSMTIGSADETKVWLNYAKDLGYITE-SLY------TSWKGTYVDIAKMLS
Q48876_9LEPT/5-116                  NFSAKEFRKYLIIALGSSDESMLWLRYCKDLGYLSE-SEC------YEWTKEYLQISKMLA
Q48877_9LEPT/5-116                  SFSIREFRKYLIIAIGSSNESIVWLKYCKEFGYLSE-TEF------AEWSDEYEQIARMLS
Q48880_9LEPT/5-116                  NFSKREFKKYLIIAIGSANESALWLRYSKDLGYITE-DQY------SEWSDECLQIAKILS
Q4C1M4_CROWT/25-134                 --STGDYVRFLNIAQGSINELETHLILSARVNLCNF-NDI------ESIIDELKQESKMII
Q4C886_CROWT/8-118                  -RYKAAFVAKLSDCEAEAAEVQVWLKFAVKCQYLPV-DTA------RDLYKSYNQIIGSLV
Q4ZNW5_PSEU2/1-107                  --TAKDKCRFLYIAKASCGELRTQLMIGSEIGYIPE-AVA------AALITETRELSKMLC
Q549T3_COXBU/6-117                  SVSTAEFKRFILIAMGSADEMRVWLRYCFDLGYLNE-KTW------VDFRNNYQDIAKMLK
Q565U4_9BACT/6-115                  --HNKDYRRFLLMAMGPCAELETQVEVSFDLKYISE-AAL------KRLLERLDHESRMLR
Q5E8I8_VIBF1/1-107                  --SNKDNIRFLFYAKGSCAELLTQVLLATEIGYLKK-DEV------SNLIIELEEINKMIA
Q5E8J7_VIBF1/1-107                  --GVKEQIRFLNYSQGSAAELITQLFIGIEIGYIEK-QKG------LELINETKEILAIVS
Q5H5F9_XANOR/16-123                 --STAECLRCLAMARGALAELDTQLQIATGLPFTLP-DVA--------IADLLNRTFAKLN
Q7MPM5_VIBVY/1-107                  --SYKDNIRFLYIAKGSCAELATQISLAADLGYIPI-EAG------QKLESEILEIGRMIG
Q7UI39_RHOBA/3-108                  --TPKDFIRFLIIAKGSCAELRTQLYISTRINLVST-QQS------ETLIDETKQISKMLQ
Q8PD29_XANCP/9-118                  --STPDYSRFLSIARGSLSELDTQVQIAARLGYSRS-EDD------QSVRRQVDLVFAKLT
Q8PQ01_XANAC/9-124                  --STSDYARFLSIARGSLSELDTQIQIAVRLGYSNP-EDEDIEPTGRPGLRQAHCIDECLT
Q8XFQ4_NOSS1/1-110                  --SKPEYIQFLHIALGSLRELDTQLIIAKEVDLADK-DLF------TPILNEVEEMQSILV
Q8YZC8_NOSS1/4-113                  --HYLDRLRFMYIARGSLAETKSAFVIAESLGYCNT-DQL------NWVTQLKDQIEKSLN


A0LYS9_GRAFK/1-108                  GF
A0M075_GRAFK/2-111                  TL
A0M3T1_GRAFK/2-111                  KF
A0M555_GRAFK/1-111                  YM
A0M634_GRAFK/7-116                  GF
A0M6C7_GRAFK/2-111                  SL
A0YI03_LYNSP/3-113                  NM
A0YV26_LYNSP/2-112                  KL
A0YW91_LYNSP/5-114                  TL
A0YY18_LYNSP/5-114                  SL
A0ZCH9_NODSP/7-117                  TI
A0ZGB3_NODSP/2-111                  SY
A0ZJI8_NODSP/4-113                  AY
A1BJM0_CHLPD/4-113                  GL
A1BJP6_CHLPD/1-110                  TF
A1HRG8_9FIRM/8-114                  AF
A1S7W2_SHEAM/1-107                  AL
A1ST26_PSYIN/1-107                  GL
A2U030_9FLAO/18-127                 AL
A2U0Y1_9FLAO/2-111                  GL
A3DEL3_CLOTH/8-117                  GY
A3HRF7_9BACT/2-112                  SF
A3HUI0_9BACT/2-111                  GL
A3HZI0_9BACT/5-114                  GF
A3I206_9BACT/4-113                  NL
A3J3H7_9FLAO/1-111                  YM
A3J705_9FLAO/1-111                  YM
A3J726_9FLAO/5-114                  AF
A3WMT7_9GAMM/1-107                  RL
A3XJS8_LEEBM/1-111                  YM
A3XMC1_LEEBM/2-112                  TL
A3XQJ4_LEEBM/5-114                  KF
A3XQX2_LEEBM/5-114                  SF
A3XR63_LEEBM/3-113                  GY
A4BEN9_9GAMM/1-95                   SQ
A4BRU2_9GAMM/5-112                  GL
A4J7I5_DESRM/3-112                  KL
A4Y8I0_SHEPC/1-107                  AI
A5FA45_FLAJ1/2-111                  SF
A5FAL8_FLAJ1/2-111                  AL
A5FHM6_FLAJ1/5-114                  AM
A5FIT5_FLAJ1/2-111                  KL
A5FKQ5_FLAJ1/5-114                  GF
A5FLY9_FLAJ1/5-115                  AF
A5G6F5_GEOUR/8-113                  GF
A5G849_GEOUR/7-112                  GL
A5G857_GEOUR/2-109                  GL
A5G861_GEOUR/6-113                  AL
A5GBK5_GEOUR/5-114                  GF
A5V1K7_ROSS1/5-114                  GL
A6AWK3_VIBHA/5-111                  SL
A6DHG8_9BACT/1-107                  SF
A6DJ80_9BACT/4-110                  SL
A6DNX3_9BACT/1-107                  AL
A6EMX2_9BACT/2-111                  SL
A6EP59_9BACT/2-111                  SF
A6ERZ8_9BACT/5-114                  NF
A6GVU0_FLAPJ/5-115                  SF
A6GYP0_FLAPJ/4-113                  AL
A6H0B8_FLAPJ/2-111                  SF
A6KX83_BACV8/4-113                  AY
A6Q868_SULNB/1-107                  GL
A7BUG8_9GAMM/1-108                  GL
A7C4I0_9GAMM/4-113                  AY
A7NJH7_ROSCS/13-123                 SK
A8FXJ2_SHESH/1-107                  SF
A8ZT12_DESOH/3-111                  RL
A9KVV0_SHEB9/1-107                  GL
B0K7W4_THEP3/3-113                  TM
B3EF74_CHLL2/4-113                  GL
B3ELY3_CHLPB/19-127                 GY
B4S3Y9_PROA2/4-113                  AL
B4S3Z1_PROA2/5-111                  GY
B4S3Z5_PROA2/3-110                  GL
B4S3Z7_PROA2/2-109                  GV
B5ED38_GEOBB/3-116                  AL
D1N3L8_9BACT/2-108                  GL
Q07ZA4_SHEFN/1-107                  TM
Q0EXY3_9PROT/2-111                  GL
Q0EZ86_9PROT/5-114                  SL
Q11QJ2_CYTH3/2-111                  NL
Q1EI17_9ZZZZ/10-121                 GL
Q1IID5_KORVE/2-111                  AF
Q1IZQ0_DEIGD/11-120                 RF
Q1K405_DESAC/5-114                  GL
Q1PUP1_9BACT/638-747                RL
Q1PVU0_9BACT/11-124                 SM
Q1Q1W9_9BACT/12-121                 GY
Q1VSR7_9FLAO/4-113                  AL
Q1VUL9_9FLAO/4-114                  KL
Q1VZG5_9FLAO/5-113                  GF
Q21IS5_SACD2/1-107                  GF
Q2BIS2_9GAMM/1-107                  TL
Q2EXW5_VIBVU/4-110                  KL
Q2S319_SALRD/1-110                  GY
Q2S5B2_SALRD/17-126                 RL
Q2YL20_BRUA2/4-113                  LL
Q39RL5_GEOMG/2-109                  GL
Q3A3M3_PELCD/4-113                  AY
Q3A3N4_PELCD/2-111                  GL
Q3AEW3_CARHZ/3-113                  RL
Q3IEI1_PSEHT/2-108                  SL
Q3M1L5_ANAVT/6-112                  GY
Q3SL15_THIDA/2-111                  GL
Q48516_LEPBO/5-116                  GL
Q48876_9LEPT/5-116                  RL
Q48877_9LEPT/5-116                  KL
Q48880_9LEPT/5-116                  KL
Q4C1M4_CROWT/25-134                 SL
Q4C886_CROWT/8-118                  KM
Q4ZNW5_PSEU2/1-107                  GL
Q549T3_COXBU/6-117                  GL
Q565U4_9BACT/6-115                  NL
Q5E8I8_VIBF1/1-107                  GY
Q5E8J7_VIBF1/1-107                  QL
Q5H5F9_XANOR/16-123                 AL
Q7MPM5_VIBVY/1-107                  GY
Q7UI39_RHOBA/3-108                  AL
Q8PD29_XANCP/9-118                  AL
Q8PQ01_XANAC/9-124                  QT
Q8XFQ4_NOSS1/1-110                  AT
Q8YZC8_NOSS1/4-113                  GY