The sequences which have been used as reference for the generation of profiles for the family 120_Rick_ant are highlighted in red. The profiles and the reference sequences for this family are given in a tar zipped format (Profiles are in ASN.1 format).
Download the tar zipped file.
Click here for help on generation of RPS-BLAST databases from the files given in above link
A5CDE1_ORITB/306-543 AFKDLKALINSVIAEDDKFKVWQQQNPSKSLDDFK---------RDTTQIDSLSQETKELL
A8EYT8_RICCK/94-347 ILREYFINTNPELAAQIAKE-----EEDKRLRAFL----SNPDHRGLIDKAFEDSETKKKL
A8GNM2_RICAH/91-350 ILKDLAALVDRDLAEQKRKEIEEEKEKDKKLSVFF----GNPANREFIDNALEKPELKKKL
C4YZZ4_9RICK/91-338 QLRLYFSTRHHELEEHT--------LDDERFKKFL--MHLNNERRTLVSSALENEKVKAAM
Q1RIG4_RICBR/101-425 LLKENAE--NPDLKSNF--------ESDEKFRDFLRTLNEDPNKKELYDKALENPELKKGL
Q1X8A4_RICPO/91-345 ILREYFVNTNPELAEQIAKE-----EDDRKFRAFL----SNQDNYALINKAFEDTKTKKNL
SCA4_RICJY/101-358 ILKDLAALTDHDLAEQKRKEIEEEKDKDKTLSTFF----GNPANREFIDKALENPELKKKL
A5CDE1_ORITB/306-543 SGIGSAGYANIMGSTAN--------------------------------------------
A8EYT8_RICCK/94-347 EAAEIQGYRNVFSIYSA--------------------------------------------
A8GNM2_RICAH/91-350 ESIEITGYKNILLTYSA--------------------------------------------
C4YZZ4_9RICK/91-338 EEIEIVGYRNIHTSFSA--------------------------------------------
Q1RIG4_RICBR/101-425 ENIEIAGYKNVHASHSAEVYHENKIKEEQEELLRKYLNNDPAYSEEAKDQEKFRQFLANLN
Q1X8A4_RICPO/91-345 EKAEIVGYKNVLSTYSV--------------------------------------------
SCA4_RICJY/101-358 ESIEIAGYKNVHNTFSA--------------------------------------------
A5CDE1_ORITB/306-543 -----------------------IEQAQQMSFAASFSTLDWATHANSVGNTTQKTITNDAG
A8EYT8_RICCK/94-347 ----------------------------EN-YKGGFKPIQWKNQV-SASSLRTTVVENDAG
A8GNM2_RICAH/91-350 ----------------------------ANGYHGGFKPVQWENQI-SASDLRATVVKNDAG
C4YZZ4_9RICK/91-338 -----------------------------EHYQGGFKPMDWSGV--ASINTRSQIIQNGVG
Q1RIG4_RICBR/101-425 AGERQGLYDKALSDEQFKGQYENIRQEYANKYVGGFRSMQWENQV-SAGDLRSTVIKNDAG
Q1X8A4_RICPO/91-345 ----------------------------ANGYQGGFQPVQWENQV-SASDLRSTVVKNDEG
SCA4_RICJY/101-358 ----------------------------ASGYPGGFKPVQWENHV-SASDLRATVVKNDAG
A5CDE1_ORITB/306-543 EKVTDLISHSHKTQ--LSASVNGVTKIVTKHRTIDIPRAVEE-NKGPLDLALVAQDTTGKN
A8EYT8_RICCK/94-347 DVLCTLNETTHNTKPFIVAKQDGTQVQVSSYREIDFPIKLDK-ADGSMHLSMVALKADGTK
A8GNM2_RICAH/91-350 DELCTLNETTVKTKPFTVAKKDGTQVQINSYRAIDFPIKLDK-ADGSMHLSMVALKADGTK
C4YZZ4_9RICK/91-338 DEICTLKEQTHTTSPLTISKQDGSTVIVNSYRTIDFPVELHEPASGTMHLSLVARDKDGKA
Q1RIG4_RICBR/101-425 EEICTLAEKTHKTAPMTVYKQDGTAVTVNSYRTIDFPIDLEG-KSGTMHLSLVAQNKEGKS
Q1X8A4_RICPO/91-345 EELCTLNETTVKTKDLIVAKQDGTQVQINSYREINFPIKLDK-ANGSMHLSMVALKADGTK
SCA4_RICJY/101-358 DELCTLNETTVKTKPFTLAKQDGTQVQISSYREIDFPIKLDK-ADGSMHLSMVALKADGTK
A5CDE1_ORITB/306-543 MPESKAVYLTAHYNQE------GKLVEMTHPEPLRFFSDEPGSPAYTVINNEVYTLPITRE
A8EYT8_RICCK/94-347 PSKNKAVYFTAHYEEG--PNGKPLLKEISSPQPLKFAGDGPDAVAYIEHGGEIYTLAVTRG
A8GNM2_RICAH/91-350 PSKDRAVYFTAHYEEG--PNGKPQLKEISSPQPLKFAGDGPDAVAYIEHGGEIYTLAVTRG
C4YZZ4_9RICK/91-338 PSLERAVYFTAHYEATPKPNGVPKLKEVSSPKPIKFLGSNKESIGYIEHGGEIYTLPVTKG
Q1RIG4_RICBR/101-425 ---NNALRFTAHYEADPHPDGTPKLKEVSSPQPIKFMGKDENAVGYIEHGGEIYTLPVTRG
Q1X8A4_RICPO/91-345 PAKDKAVYFTAHYEEG--PNGKPQLKEISSPQPLKFVGTGDDAVAYIEHGGEIYTLAVTRG
SCA4_RICJY/101-358 PSKDKAVYFTAHYEEG--PNGKPQLKEISSPKPLKFAGTGDDAIAYIEHGGEIYTLAVTRG
A5CDE1_ORITB/306-543 KYDQLTKEISQN-----------------IQEQDK
A8EYT8_RICCK/94-347 KYNEMMKEVELNKGQAIDLSQTIAEDLTKVQGRAQ
A8GNM2_RICAH/91-350 KYKEMMKEVELHQGHSVDLSQIIAEDLTKVQGRSQ
C4YZZ4_9RICK/91-338 KYEEMMKEVAKNQGQAVDLSL-------EVEPQAQ
Q1RIG4_RICBR/101-425 KYEAMMKEVAVNKGQGVDVSQTIEQDIYRVQGGEK
Q1X8A4_RICPO/91-345 KYKEMMKEVALNHGQSVALSQTIAEDLTHVQGPSH
SCA4_RICJY/101-358 KYKEMMKEVELNQGQSVDLSQ--AEDIIIGQGQSK